WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y59E1A.1.1 Sequence Name  Y59E1A.1.1
Length (nt)  1011   Chromosome Location  X: 1940632-1942199
Chromosome . Primary Identifier  X Chromosome Location . Start  1940632
Chromosome Location . End  1942199 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y59E1A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021987 fbxa-40 Y59E1A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59E1A.1 Y59E1A.1 1011   X: 1940632-1940850

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y59E1A.1.1 1940632 1942199 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224805   219   X: 1940632-1940850 Caenorhabditis elegans
Exon224806   628   X: 1940902-1941529 Caenorhabditis elegans
Exon224807   164   X: 1942036-1942199 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y59E1A.1.1 1940632 1942199 -1

1 Sequence

Length
1011

1 Sequence Ontology Term

Identifier Name Description
transcript