WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52D2.1.1 Sequence Name  F52D2.1.1
Length (nt)  1011   Chromosome Location  X: 1949161-1950728
Chromosome . Primary Identifier  X Chromosome Location . Start  1949161
Chromosome Location . End  1950728 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52D2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018684 fbxa-41 F52D2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52D2.1 F52D2.1 1011   X: 1949161-1949379

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52D2.1.1 1949161 1950728 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224815   219   X: 1949161-1949379 Caenorhabditis elegans
Exon224816   628   X: 1949431-1950058 Caenorhabditis elegans
Exon224817   164   X: 1950565-1950728 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52D2.1.1 1949161 1950728 -1

1 Sequence

Length
1011

1 Sequence Ontology Term

Identifier Name Description
transcript