WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Hide

Oops!

http://intermine.wormbase.org/tools/wormmine/service/ is incorrect

mRNA :

WormMine ID  Transcript:F52D2.2.1 Sequence Name  F52D2.2.1
Length (nt)  690   Chromosome Location  X: 1952479-1953560
Chromosome . Primary Identifier  X Chromosome Location . Start  1952479
Chromosome Location . End  1953560 Method  Coding_transcript
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52D2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004351 rgs-8.1 F52D2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52D2.2 F52D2.2 690   X: 1952479-1952551

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52D2.2.1 1952479 1953560 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224818   73   X: 1952479-1952551 Caenorhabditis elegans
Exon224819   116   X: 1952803-1952918 Caenorhabditis elegans
Exon224820   170   X: 1952968-1953137 Caenorhabditis elegans
Exon224821   131   X: 1953182-1953312 Caenorhabditis elegans
Exon224822   200   X: 1953361-1953560 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52D2.2.1 1952479 1953560 -1

1 Sequence

Length
690

1 Sequence Ontology Term

Identifier Name Description
transcript