WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52D2.5.2 Sequence Name  F52D2.5.2
Length (nt)  728   Chromosome Location  X: 1973511-1974773
Chromosome . Primary Identifier  X Chromosome Location . Start  1973511
Chromosome Location . End  1974773 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52D2.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018687 F52D2.5 F52D2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52D2.5 F52D2.5 198   X: 1973853-1973854

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52D2.5.2 1973511 1974773 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224843   144   X: 1973511-1973654 Caenorhabditis elegans
Exon224845   138   X: 1973717-1973854 Caenorhabditis elegans
Exon224847   71   X: 1974276-1974346 Caenorhabditis elegans
Exon224849   375   X: 1974399-1974773 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52D2.5.2 1973511 1974773 -1

1 Sequence

Length
728

1 Sequence Ontology Term

Identifier Name Description
transcript