WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y102A11A.6.1 Sequence Name  Y102A11A.6.1
Length (nt)  1117   Chromosome Location  X: 2031868-2035272
Chromosome . Primary Identifier  X Chromosome Location . Start  2031868
Chromosome Location . End  2035272 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102A11A.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022416 ergi-1 Y102A11A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y102A11A.6 Y102A11A.6 861   X: 2032045-2032152

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y102A11A.6.1 2031868 2035272 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224961   285   X: 2031868-2032152 Caenorhabditis elegans
Exon224962   285   X: 2032212-2032496 Caenorhabditis elegans
Exon224963   227   X: 2032806-2033032 Caenorhabditis elegans
Exon224964   89   X: 2033083-2033171 Caenorhabditis elegans
Exon224965   135   X: 2034989-2035123 Caenorhabditis elegans
Exon224966   96   X: 2035177-2035272 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y102A11A.6.1 2031868 2035272 -1

1 Sequence

Length
1117

1 Sequence Ontology Term

Identifier Name Description
transcript