WormMine: Gene WBGene00199972

• WormBase Gene ID: WBGene00199972
• Gene Name: Y102A11A.13
• Sequence Name: Y102A11A.13
• Organism: Caenorhabditis elegans
• Automated Description: Enriched in sensory neurons based on RNA-seq studies. Is affected by cep-1 and set-2 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 148

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00199972

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:Y102A11A.13	Y102A11A.13	148	X: 2048919-2049066

Other

0 CDSs

0 RNAi Result

5 Allele

• gk963725
• gk963864
• gk272678
• gk687740
• gk829839

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: WBGene00199972
• Start: 2048919
• End: 2049066
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrX_2049067..2051823
• Length (nt): 2757
• Chromosome Location: X: 2049067-2051823
• Organism: Caenorhabditis elegans

3 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in set-2(zr2012) animals at embryo stage, comparing to in N2 animals.	DESeq2 (v2.1.8.3) was used to determine DE genes and to generate principal component and scatter plots. DE genes with FDR < 0.05 were analysed using g:Profiler with Bonferroni correction.	WBPaper00060014:set-2(zr2012)_upregulated
	Transcripts that showed significantly increased expression in sensory neuron (labeled by iaIs25[Pgcy-37::GFP + unc-119(+)]) comparing to in whole worm.	Fold change > 2, p-value < 0.05.	WBPaper00060661:sensory-neuron_enriched
	ncRNAs with significantly increased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq.	ncRNAs with more than 2 fold difference in expression are considered differentially expressed	WBPaper00045380:cep-1(gk138)_upregulated_normal

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00199972
• Start: 2048919
• End: 2049066
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 148

1 Sequence Ontology Term