WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49H12.6b.1 Sequence Name  F49H12.6b.1
Length (nt)  2321   Chromosome Location  X: 2066558-2070444
Chromosome . Primary Identifier  X Chromosome Location . Start  2066558
Chromosome Location . End  2070444 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49H12.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018657 acl-4 F49H12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49H12.6b F49H12.6b 1233   X: 2066968-2067065

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49H12.6b.1 2066558 2070444 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224997   508   X: 2066558-2067065 Caenorhabditis elegans
Exon225000   99   X: 2067116-2067214 Caenorhabditis elegans
Exon225003   77   X: 2067303-2067379 Caenorhabditis elegans
Exon225006   302   X: 2067451-2067752 Caenorhabditis elegans
Exon225009   400   X: 2067807-2068206 Caenorhabditis elegans
Exon225012   150   X: 2068281-2068430 Caenorhabditis elegans
Exon225015   238   X: 2068515-2068752 Caenorhabditis elegans
Exon225020   63   X: 2069526-2069588 Caenorhabditis elegans
Exon225022   283   X: 2069690-2069972 Caenorhabditis elegans
Exon225026   201   X: 2070244-2070444 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49H12.6b.1 2066558 2070444 -1

1 Sequence

Length
2321

1 Sequence Ontology Term

Identifier Name Description
transcript