WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49H12.6b.2 Sequence Name  F49H12.6b.2
Length (nt)  2248   Chromosome Location  X: 2066564-2070440
Chromosome . Primary Identifier  X Chromosome Location . Start  2066564
Chromosome Location . End  2070440 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49H12.6b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018657 acl-4 F49H12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49H12.6b F49H12.6b 1233   X: 2066968-2067065

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49H12.6b.2 2066564 2070440 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon224998   502   X: 2066564-2067065 Caenorhabditis elegans
Exon225001   99   X: 2067116-2067214 Caenorhabditis elegans
Exon225004   77   X: 2067303-2067379 Caenorhabditis elegans
Exon225007   302   X: 2067451-2067752 Caenorhabditis elegans
Exon225010   400   X: 2067807-2068206 Caenorhabditis elegans
Exon225013   150   X: 2068281-2068430 Caenorhabditis elegans
Exon225016   238   X: 2068515-2068752 Caenorhabditis elegans
Exon225023   283   X: 2069690-2069972 Caenorhabditis elegans
Exon225024   197   X: 2070244-2070440 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49H12.6b.2 2066564 2070440 -1

1 Sequence

Length
2248

1 Sequence Ontology Term

Identifier Name Description
transcript