WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49H12.4.1 Sequence Name  F49H12.4.1
Length (nt)  678   Chromosome Location  X: 2079836-2081687
Chromosome . Primary Identifier  X Chromosome Location . Start  2079836
Chromosome Location . End  2081687 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49H12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018655 F49H12.4 F49H12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49H12.4 F49H12.4 378   X: 2079845-2079968

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49H12.4.1 2079836 2081687 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225034   133   X: 2079836-2079968 Caenorhabditis elegans
Exon225035   115   X: 2080366-2080480 Caenorhabditis elegans
Exon225036   121   X: 2080529-2080649 Caenorhabditis elegans
Exon225037   309   X: 2081379-2081687 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49H12.4.1 2079836 2081687 1

1 Sequence

Length
678

1 Sequence Ontology Term

Identifier Name Description
transcript