WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53B1.3.1 Sequence Name  F53B1.3.1
Length (nt)  849   Chromosome Location  X: 2105610-2107535
Chromosome . Primary Identifier  X Chromosome Location . Start  2105610
Chromosome Location . End  2107535 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018736 F53B1.3 F53B1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53B1.3 F53B1.3 363   X: 2105632-2105774

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53B1.3.1 2105610 2107535 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225082   165   X: 2105610-2105774 Caenorhabditis elegans
Exon225083   70   X: 2106780-2106849 Caenorhabditis elegans
Exon225084   614   X: 2106922-2107535 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53B1.3.1 2105610 2107535 1

1 Sequence

Length
849

1 Sequence Ontology Term

Identifier Name Description
transcript