WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53B1.8b.1 Sequence Name  F53B1.8b.1
Length (nt)  2232   Chromosome Location  X: 2124111-2128787
Chromosome . Primary Identifier  X Chromosome Location . Start  2124111
Chromosome Location . End  2128787 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B1.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018739 F53B1.8 F53B1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53B1.8b F53B1.8b 2232   X: 2124111-2124191

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53B1.8b.1 2124111 2128787 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225119   81   X: 2124111-2124191 Caenorhabditis elegans
Exon225121   156   X: 2125013-2125168 Caenorhabditis elegans
Exon225123   321   X: 2125217-2125537 Caenorhabditis elegans
Exon225127   190   X: 2125878-2126067 Caenorhabditis elegans
Exon225129   445   X: 2126120-2126564 Caenorhabditis elegans
Exon225131   251   X: 2127033-2127283 Caenorhabditis elegans
Exon225133   322   X: 2127334-2127655 Caenorhabditis elegans
Exon225135   292   X: 2127817-2128108 Caenorhabditis elegans
Exon225138   150   X: 2128535-2128684 Caenorhabditis elegans
Exon225139   24   X: 2128764-2128787 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53B1.8b.1 2124111 2128787 -1

1 Sequence

Length
2232

1 Sequence Ontology Term

Identifier Name Description
transcript