WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48B9.5.1 Sequence Name  F48B9.5.1
Length (nt)  1891   Chromosome Location  X: 2147279-2150106
Chromosome . Primary Identifier  X Chromosome Location . Start  2147279
Chromosome Location . End  2150106 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48B9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018591 npax-2 F48B9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48B9.5 F48B9.5 702   X: 2147614-2147671

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F48B9.5.1 2147279 2150106 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225147   393   X: 2147279-2147671 Caenorhabditis elegans
Exon225148   102   X: 2147718-2147819 Caenorhabditis elegans
Exon225149   87   X: 2147866-2147952 Caenorhabditis elegans
Exon225150   74   X: 2147999-2148072 Caenorhabditis elegans
Exon225151   83   X: 2148123-2148205 Caenorhabditis elegans
Exon225152   133   X: 2148824-2148956 Caenorhabditis elegans
Exon225153   96   X: 2149004-2149099 Caenorhabditis elegans
Exon225154   923   X: 2149184-2150106 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F48B9.5.1 2147279 2150106 -1

1 Sequence

Length
1891

1 Sequence Ontology Term

Identifier Name Description
transcript