WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Hide

Oops!

http://intermine.wormbase.org/tools/wormmine/service/ is incorrect

mRNA :

WormMine ID  Transcript:F48B9.8.1 Sequence Name  F48B9.8.1
Length (nt)  953   Chromosome Location  X: 2173890-2176411
Chromosome . Primary Identifier  X Chromosome Location . Start  2173890
Chromosome Location . End  2176411 Method  Coding_transcript
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48B9.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018593 F48B9.8 F48B9.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48B9.8 F48B9.8 792   X: 2174029-2174167

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F48B9.8.1 2173890 2176411 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225171   278   X: 2173890-2174167 Caenorhabditis elegans
Exon225172   158   X: 2174798-2174955 Caenorhabditis elegans
Exon225173   121   X: 2175002-2175122 Caenorhabditis elegans
Exon225174   105   X: 2175171-2175275 Caenorhabditis elegans
Exon225175   104   X: 2175323-2175426 Caenorhabditis elegans
Exon225176   187   X: 2176225-2176411 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F48B9.8.1 2173890 2176411 -1

1 Sequence

Length
953

1 Sequence Ontology Term

Identifier Name Description
transcript