WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T24C12.2b.1 Sequence Name  T24C12.2b.1
Length (nt)  4625   Chromosome Location  X: 2180888-2196512
Chromosome . Primary Identifier  X Chromosome Location . Start  2180888
Chromosome Location . End  2196512 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T24C12.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001515 gap-1 T24C12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T24C12.2b T24C12.2b 3489   X: 2180898-2181572

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T24C12.2b.1 2180888 2196512 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225177   685   X: 2180888-2181572 Caenorhabditis elegans
Exon225179   201   X: 2182398-2182598 Caenorhabditis elegans
Exon225181   114   X: 2183082-2183195 Caenorhabditis elegans
Exon225183   129   X: 2183245-2183373 Caenorhabditis elegans
Exon225185   102   X: 2183424-2183525 Caenorhabditis elegans
Exon225187   164   X: 2184436-2184599 Caenorhabditis elegans
Exon225189   74   X: 2185767-2185840 Caenorhabditis elegans
Exon225191   175   X: 2186727-2186901 Caenorhabditis elegans
Exon225193   79   X: 2192521-2192599 Caenorhabditis elegans
Exon225195   314   X: 2192669-2192982 Caenorhabditis elegans
Exon225197   192   X: 2193521-2193712 Caenorhabditis elegans
Exon225199   115   X: 2193766-2193880 Caenorhabditis elegans
Exon225201   196   X: 2193932-2194127 Caenorhabditis elegans
Exon225203   200   X: 2194178-2194377 Caenorhabditis elegans
Exon225205   129   X: 2194425-2194553 Caenorhabditis elegans
Exon225207   251   X: 2194603-2194853 Caenorhabditis elegans
Exon225209   106   X: 2194905-2195010 Caenorhabditis elegans
Exon225210   225   X: 2195058-2195282 Caenorhabditis elegans
Exon225212   1174   X: 2195339-2196512 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T24C12.2b.1 2180888 2196512 1

1 Sequence

Length
4625

1 Sequence Ontology Term

Identifier Name Description
transcript