WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T24C12.2a.1 Sequence Name  T24C12.2a.1
Length (nt)  1890   Chromosome Location  X: 2192504-2195348
Chromosome . Primary Identifier  X Chromosome Location . Start  2192504
Chromosome Location . End  2195348 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T24C12.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001515 gap-1 T24C12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T24C12.2a T24C12.2a 1890   X: 2192504-2192599

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T24C12.2a.1 2192504 2195348 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225192   96   X: 2192504-2192599 Caenorhabditis elegans
Exon225194   314   X: 2192669-2192982 Caenorhabditis elegans
Exon225196   192   X: 2193521-2193712 Caenorhabditis elegans
Exon225198   115   X: 2193766-2193880 Caenorhabditis elegans
Exon225200   196   X: 2193932-2194127 Caenorhabditis elegans
Exon225202   200   X: 2194178-2194377 Caenorhabditis elegans
Exon225204   129   X: 2194425-2194553 Caenorhabditis elegans
Exon225206   251   X: 2194603-2194853 Caenorhabditis elegans
Exon225208   106   X: 2194905-2195010 Caenorhabditis elegans
Exon225211   291   X: 2195058-2195348 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T24C12.2a.1 2192504 2195348 1

1 Sequence

Length
1890

1 Sequence Ontology Term

Identifier Name Description
transcript