WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00199772 Gene Name  T14F9.17
Sequence Name  ? T14F9.17 Organism  Caenorhabditis elegans
Automated Description  Is affected by met-2 and spr-5 based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 275
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00199772

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T14F9.17 T14F9.17 275   X: 2210201-2210475
 

Other

0 CDSs

0 RNAi Result

9 Allele

Public Name
gk963725
gk963864
WBVar01600994
WBVar01600993
gk672153
gk374968
gk457449
WBVar02048626
otn4545

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00199772 2210201 2210475 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_2206724..2210200   3477 X: 2206724-2210200 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in spr-5(by101);met-2(n4256) L1 animals comparing to in N2 control. DeSeq2 (v.2.11.40.2), p < 0.05. WBPaper00060886:spr-5(by101);met-2(n4256)_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00199772 2210201 2210475 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
275

1 Sequence Ontology Term