WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10H10.3.1 Sequence Name  T10H10.3.1
Length (nt)  1329   Chromosome Location  X: 2283998-2287192
Chromosome . Primary Identifier  X Chromosome Location . Start  2283998
Chromosome Location . End  2287192 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10H10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020427 sav-1 T10H10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10H10.3 T10H10.3 1170   X: 2284153-2284240

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10H10.3.1 2283998 2287192 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225368   243   X: 2283998-2284240 Caenorhabditis elegans
Exon225369   89   X: 2284314-2284402 Caenorhabditis elegans
Exon225370   193   X: 2284460-2284652 Caenorhabditis elegans
Exon225371   181   X: 2284705-2284885 Caenorhabditis elegans
Exon225372   101   X: 2284931-2285031 Caenorhabditis elegans
Exon225373   90   X: 2285437-2285526 Caenorhabditis elegans
Exon225374   93   X: 2285843-2285935 Caenorhabditis elegans
Exon225375   238   X: 2286792-2287029 Caenorhabditis elegans
Exon225376   101   X: 2287092-2287192 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10H10.3.1 2283998 2287192 -1

1 Sequence

Length
1329

1 Sequence Ontology Term

Identifier Name Description
transcript