WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01B6.1.1 Sequence Name  T01B6.1.1
Length (nt)  1119   Chromosome Location  X: 2335684-2348643
Chromosome . Primary Identifier  X Chromosome Location . Start  2335684
Chromosome Location . End  2348643 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01B6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020134 T01B6.1 T01B6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01B6.1 T01B6.1 996   X: 2335742-2335746

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01B6.1.1 2335684 2348643 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225443   63   X: 2335684-2335746 Caenorhabditis elegans
Exon225444   118   X: 2335815-2335932 Caenorhabditis elegans
Exon225445   84   X: 2336240-2336323 Caenorhabditis elegans
Exon225446   124   X: 2337280-2337403 Caenorhabditis elegans
Exon225447   107   X: 2337451-2337557 Caenorhabditis elegans
Exon225457   147   X: 2345485-2345631 Caenorhabditis elegans
Exon225458   123   X: 2346857-2346979 Caenorhabditis elegans
Exon225459   78   X: 2347962-2348039 Caenorhabditis elegans
Exon225460   86   X: 2348285-2348370 Caenorhabditis elegans
Exon225461   189   X: 2348455-2348643 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01B6.1.1 2335684 2348643 1

1 Sequence

Length
1119

1 Sequence Ontology Term

Identifier Name Description
transcript