WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43H6.6.1 Sequence Name  C43H6.6.1
Length (nt)  1941   Chromosome Location  X: 2395283-2398827
Chromosome . Primary Identifier  X Chromosome Location . Start  2395283
Chromosome Location . End  2398827 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43H6.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016619 C43H6.6 C43H6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43H6.6 C43H6.6 1545   X: 2395505-2395604

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43H6.6.1 2395283 2398827 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225560   322   X: 2395283-2395604 Caenorhabditis elegans
Exon225561   204   X: 2395659-2395862 Caenorhabditis elegans
Exon225562   62   X: 2395972-2396033 Caenorhabditis elegans
Exon225563   91   X: 2396076-2396166 Caenorhabditis elegans
Exon225564   165   X: 2396878-2397042 Caenorhabditis elegans
Exon225565   106   X: 2397088-2397193 Caenorhabditis elegans
Exon225566   275   X: 2397240-2397514 Caenorhabditis elegans
Exon225567   123   X: 2397568-2397690 Caenorhabditis elegans
Exon225568   298   X: 2398183-2398480 Caenorhabditis elegans
Exon225569   295   X: 2398533-2398827 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43H6.6.1 2395283 2398827 1

1 Sequence

Length
1941

1 Sequence Ontology Term

Identifier Name Description
transcript