WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43H6.7a.1 Sequence Name  C43H6.7a.1
Length (nt)  1192   Chromosome Location  X: 2398812-2402036
Chromosome . Primary Identifier  X Chromosome Location . Start  2398812
Chromosome Location . End  2402036 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43H6.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016620 dhhc-9 C43H6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43H6.7a C43H6.7a 936   X: 2398971-2399162

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43H6.7a.1 2398812 2402036 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225571   351   X: 2398812-2399162 Caenorhabditis elegans
Exon225572   125   X: 2399218-2399342 Caenorhabditis elegans
Exon225574   76   X: 2400284-2400359 Caenorhabditis elegans
Exon225576   234   X: 2400414-2400647 Caenorhabditis elegans
Exon225578   115   X: 2400696-2400810 Caenorhabditis elegans
Exon225580   80   X: 2401371-2401450 Caenorhabditis elegans
Exon225582   104   X: 2401766-2401869 Caenorhabditis elegans
Exon225584   107   X: 2401930-2402036 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43H6.7a.1 2398812 2402036 -1

1 Sequence

Length
1192

1 Sequence Ontology Term

Identifier Name Description
transcript