WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43H6.4.1 Sequence Name  C43H6.4.1
Length (nt)  2187   Chromosome Location  X: 2404024-2407364
Chromosome . Primary Identifier  X Chromosome Location . Start  2404024
Chromosome Location . End  2407364 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43H6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016617 C43H6.4 C43H6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43H6.4 C43H6.4 1884   X: 2404032-2404177

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43H6.4.1 2404024 2407364 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225586   154   X: 2404024-2404177 Caenorhabditis elegans
Exon225587   79   X: 2404221-2404299 Caenorhabditis elegans
Exon225588   160   X: 2404344-2404503 Caenorhabditis elegans
Exon225589   134   X: 2404558-2404691 Caenorhabditis elegans
Exon225590   243   X: 2404985-2405227 Caenorhabditis elegans
Exon225591   288   X: 2405284-2405571 Caenorhabditis elegans
Exon225592   117   X: 2405618-2405734 Caenorhabditis elegans
Exon225593   116   X: 2405788-2405903 Caenorhabditis elegans
Exon225594   135   X: 2406112-2406246 Caenorhabditis elegans
Exon225595   89   X: 2406299-2406387 Caenorhabditis elegans
Exon225596   672   X: 2406693-2407364 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43H6.4.1 2404024 2407364 1

1 Sequence

Length
2187

1 Sequence Ontology Term

Identifier Name Description
transcript