WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43H6.9a.2 Sequence Name  C43H6.9a.2
Length (nt)  2410   Chromosome Location  X: 2413909-2418821
Chromosome . Primary Identifier  X Chromosome Location . Start  2413909
Chromosome Location . End  2418821 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43H6.9a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001618 glr-7 C43H6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43H6.9a C43H6.9a 2016   X: 2414064-2414274

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43H6.9a.2 2413909 2418821 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225633   366   X: 2413909-2414274 Caenorhabditis elegans
Exon225637   204   X: 2414767-2414970 Caenorhabditis elegans
Exon225640   133   X: 2415023-2415155 Caenorhabditis elegans
Exon225643   191   X: 2415202-2415392 Caenorhabditis elegans
Exon225646   111   X: 2415440-2415550 Caenorhabditis elegans
Exon225650   139   X: 2415608-2415746 Caenorhabditis elegans
Exon225654   80   X: 2416493-2416572 Caenorhabditis elegans
Exon225657   449   X: 2416620-2417068 Caenorhabditis elegans
Exon225660   168   X: 2417117-2417284 Caenorhabditis elegans
Exon225663   210   X: 2417340-2417549 Caenorhabditis elegans
Exon225666   162   X: 2417601-2417762 Caenorhabditis elegans
Exon225669   51   X: 2417842-2417892 Caenorhabditis elegans
Exon225671   67   X: 2418577-2418643 Caenorhabditis elegans
Exon225673   52   X: 2418701-2418752 Caenorhabditis elegans
Exon225674   27   X: 2418795-2418821 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43H6.9a.2 2413909 2418821 -1

1 Sequence

Length
2410

1 Sequence Ontology Term

Identifier Name Description
transcript