WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43H6.9a.1 Sequence Name  C43H6.9a.1
Length (nt)  2264   Chromosome Location  X: 2413909-2417892
Chromosome . Primary Identifier  X Chromosome Location . Start  2413909
Chromosome Location . End  2417892 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43H6.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001618 glr-7 C43H6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43H6.9a C43H6.9a 2016   X: 2414064-2414274

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43H6.9a.1 2413909 2417892 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225613   366   X: 2413909-2414274 Caenorhabditis elegans
Exon225616   204   X: 2414767-2414970 Caenorhabditis elegans
Exon225619   133   X: 2415023-2415155 Caenorhabditis elegans
Exon225622   191   X: 2415202-2415392 Caenorhabditis elegans
Exon225625   111   X: 2415440-2415550 Caenorhabditis elegans
Exon225629   139   X: 2415608-2415746 Caenorhabditis elegans
Exon225633   80   X: 2416493-2416572 Caenorhabditis elegans
Exon225636   449   X: 2416620-2417068 Caenorhabditis elegans
Exon225639   168   X: 2417117-2417284 Caenorhabditis elegans
Exon225642   210   X: 2417340-2417549 Caenorhabditis elegans
Exon225645   162   X: 2417601-2417762 Caenorhabditis elegans
Exon225648   51   X: 2417842-2417892 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43H6.9a.1 2413909 2417892 -1

1 Sequence

Length
2264

1 Sequence Ontology Term

Identifier Name Description
transcript