WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07D1.1b.1 Sequence Name  T07D1.1b.1
Length (nt)  2616   Chromosome Location  X: 2419955-2427504
Chromosome . Primary Identifier  X Chromosome Location . Start  2419955
Chromosome Location . End  2427504 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07D1.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001551 gcy-31 T07D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07D1.1b T07D1.1b 2109   X: 2420462-2420629

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07D1.1b.1 2419955 2427504 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225658   675   X: 2419955-2420629 Caenorhabditis elegans
Exon225663   138   X: 2421322-2421459 Caenorhabditis elegans
Exon225667   99   X: 2421516-2421614 Caenorhabditis elegans
Exon225671   270   X: 2421662-2421931 Caenorhabditis elegans
Exon225675   147   X: 2421992-2422138 Caenorhabditis elegans
Exon225679   147   X: 2422184-2422330 Caenorhabditis elegans
Exon225683   130   X: 2422381-2422510 Caenorhabditis elegans
Exon225686   115   X: 2422560-2422674 Caenorhabditis elegans
Exon225689   103   X: 2422719-2422821 Caenorhabditis elegans
Exon225692   106   X: 2423575-2423680 Caenorhabditis elegans
Exon225696   116   X: 2423957-2424072 Caenorhabditis elegans
Exon225700   169   X: 2424127-2424295 Caenorhabditis elegans
Exon225705   149   X: 2426577-2426725 Caenorhabditis elegans
Exon225709   174   X: 2426836-2427009 Caenorhabditis elegans
Exon225712   78   X: 2427427-2427504 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07D1.1b.1 2419955 2427504 -1

1 Sequence

Length
2616

1 Sequence Ontology Term

Identifier Name Description
transcript