WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02E10.2a.1 Sequence Name  K02E10.2a.1
Length (nt)  2516   Chromosome Location  X: 2489048-2494339
Chromosome . Primary Identifier  X Chromosome Location . Start  2489048
Chromosome Location . End  2494339 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02E10.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001844 hid-1 K02E10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02E10.2a K02E10.2a 2190   X: 2489090-2489158

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02E10.2a.1 2489048 2494339 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225861   111   X: 2489048-2489158 Caenorhabditis elegans
Exon225863   189   X: 2489371-2489559 Caenorhabditis elegans
Exon225865   186   X: 2489608-2489793 Caenorhabditis elegans
Exon225867   169   X: 2489841-2490009 Caenorhabditis elegans
Exon225869   179   X: 2490297-2490475 Caenorhabditis elegans
Exon225871   343   X: 2490531-2490873 Caenorhabditis elegans
Exon225873   152   X: 2490922-2491073 Caenorhabditis elegans
Exon225875   79   X: 2491739-2491817 Caenorhabditis elegans
Exon225877   165   X: 2491891-2492055 Caenorhabditis elegans
Exon225879   117   X: 2492109-2492225 Caenorhabditis elegans
Exon225881   105   X: 2492278-2492382 Caenorhabditis elegans
Exon225883   96   X: 2492433-2492528 Caenorhabditis elegans
Exon225885   118   X: 2492839-2492956 Caenorhabditis elegans
Exon225887   159   X: 2493147-2493305 Caenorhabditis elegans
Exon225889   348   X: 2493992-2494339 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02E10.2a.1 2489048 2494339 1

1 Sequence

Length
2516

1 Sequence Ontology Term

Identifier Name Description
transcript