WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02E10.8b.1 Sequence Name  K02E10.8b.1
Length (nt)  2613   Chromosome Location  X: 2509313-2515323
Chromosome . Primary Identifier  X Chromosome Location . Start  2509313
Chromosome Location . End  2515323 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02E10.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006365 syg-1 K02E10.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02E10.8b K02E10.8b 2193   X: 2509719-2509870

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02E10.8b.1 2509313 2515323 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon225908   558   X: 2509313-2509870 Caenorhabditis elegans
Exon225911   178   X: 2509927-2510104 Caenorhabditis elegans
Exon225915   104   X: 2510279-2510382 Caenorhabditis elegans
Exon225918   129   X: 2510434-2510562 Caenorhabditis elegans
Exon225923   160   X: 2511058-2511217 Caenorhabditis elegans
Exon225926   152   X: 2511263-2511414 Caenorhabditis elegans
Exon225929   107   X: 2511463-2511569 Caenorhabditis elegans
Exon225932   148   X: 2511627-2511774 Caenorhabditis elegans
Exon225935   109   X: 2511890-2511998 Caenorhabditis elegans
Exon225938   186   X: 2512123-2512308 Caenorhabditis elegans
Exon225941   73   X: 2512362-2512434 Caenorhabditis elegans
Exon225944   121   X: 2513296-2513416 Caenorhabditis elegans
Exon225947   198   X: 2513464-2513661 Caenorhabditis elegans
Exon225952   106   X: 2514162-2514267 Caenorhabditis elegans
Exon225955   123   X: 2514839-2514961 Caenorhabditis elegans
Exon225958   161   X: 2515163-2515323 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02E10.8b.1 2509313 2515323 -1

1 Sequence

Length
2613

1 Sequence Ontology Term

Identifier Name Description
transcript