WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52H2.4 Sequence Name  F52H2.4
Length (nt)  1698   Chromosome Location  X: 2543429-2543559
Chromosome . Primary Identifier  X Chromosome Location . Start  2543429
Chromosome Location . End  2543559
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52H2.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54590 SMVT-1 62.4 565 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00048024

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52H2.4 2543429 2543559 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018716 smvt-1 F52H2.4 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52H2.4 2543429 2543559 -1
CDS:F52H2.4 2544778 2544881 -1
CDS:F52H2.4 2544926 2545020 -1
CDS:F52H2.4 2545068 2545226 -1
CDS:F52H2.4 2545277 2545347 -1
CDS:F52H2.4 2545992 2546119 -1
CDS:F52H2.4 2546165 2546371 -1
CDS:F52H2.4 2546432 2546572 -1
CDS:F52H2.4 2546864 2547015 -1
CDS:F52H2.4 2547062 2547184 -1
CDS:F52H2.4 2547813 2547875 -1
CDS:F52H2.4 2547927 2548046 -1
CDS:F52H2.4 2548669 2548747 -1
CDS:F52H2.4 2548842 2548966 -1

1 Sequence

Length
1698

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52H2.4.1 F52H2.4.1 1965   X: 2543180-2548984