WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52H2.2b Sequence Name  F52H2.2b
Length (nt)  1590   Chromosome Location  X: 2552436-2552536
Chromosome . Primary Identifier  X Chromosome Location . Start  2552436
Chromosome Location . End  2552536
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52H2.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50751 AAT-3, isoform b 57.8 529 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00112390
WBRNAi00048022
WBRNAi00015436
WBRNAi00032637
WBRNAi00023484

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52H2.2b 2552436 2552536 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000004 aat-3 F52H2.2 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52H2.2b 2552436 2552536 1
CDS:F52H2.2b 2554231 2554297 1
CDS:F52H2.2b 2554358 2554475 1
CDS:F52H2.2b 2555065 2555254 1
CDS:F52H2.2b 2555312 2555427 1
CDS:F52H2.2b 2555495 2555620 1
CDS:F52H2.2b 2555673 2555826 1
CDS:F52H2.2b 2555883 2556006 1
CDS:F52H2.2b 2556054 2556157 1
CDS:F52H2.2b 2556891 2556987 1
CDS:F52H2.2b 2557036 2557366 1
CDS:F52H2.2b 2557414 2557475 1

1 Sequence

Length
1590

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52H2.2b.1 F52H2.2b.1 2020   X: 2552260-2557729