WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T03G6.2b Sequence Name  T03G6.2b
Length (nt)  1305   Chromosome Location  X: 2594097-2594109
Chromosome . Primary Identifier  X Chromosome Location . Start  2594097
Chromosome Location . End  2594109
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03G6.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31228 NHR-40, isoform b 49.9 434 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00000541
WBRNAi00052309
WBRNAi00078890
WBRNAi00035107
WBRNAi00078892
WBRNAi00078891

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T03G6.2b 2594097 2594109 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003630 nhr-40 T03G6.2 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:T03G6.2b 2594097 2594109 1
CDS:T03G6.2b 2600806 2600924 1
CDS:T03G6.2b 2601750 2601801 1
CDS:T03G6.2b 2601848 2601913 1
CDS:T03G6.2b 2602550 2602764 1
CDS:T03G6.2b 2602814 2602929 1
CDS:T03G6.2b 2603306 2603483 1
CDS:T03G6.2b 2604381 2604471 1
CDS:T03G6.2b 2604525 2604621 1
CDS:T03G6.2b 2604709 2604818 1
CDS:T03G6.2b 2604981 2605132 1
CDS:T03G6.2b 2606179 2606274 1

1 Sequence

Length
1305

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T03G6.2b.1 T03G6.2b.1 1857   X: 2594003-2606732