WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03G6.1.1 Sequence Name  T03G6.1.1
Length (nt)  1096   Chromosome Location  X: 2608228-2609926
Chromosome . Primary Identifier  X Chromosome Location . Start  2608228
Chromosome Location . End  2609926 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03G6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020194 T03G6.1 T03G6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03G6.1 T03G6.1 1002   X: 2608232-2608519

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03G6.1.1 2608228 2609926 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226125   292   X: 2608228-2608519 Caenorhabditis elegans
Exon226126   77   X: 2608822-2608898 Caenorhabditis elegans
Exon226127   96   X: 2608950-2609045 Caenorhabditis elegans
Exon226128   84   X: 2609098-2609181 Caenorhabditis elegans
Exon226129   151   X: 2609237-2609387 Caenorhabditis elegans
Exon226130   104   X: 2609435-2609538 Caenorhabditis elegans
Exon226131   94   X: 2609590-2609683 Caenorhabditis elegans
Exon226132   198   X: 2609729-2609926 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03G6.1.1 2608228 2609926 1

1 Sequence

Length
1096

1 Sequence Ontology Term

Identifier Name Description
transcript