WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T02C5.3a Sequence Name  T02C5.3a
Length (nt)  1770   Chromosome Location  X: 2699280-2699409
Chromosome . Primary Identifier  X Chromosome Location . Start  2699280
Chromosome Location . End  2699409
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02C5.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34589 IGCM-3, isoform a 64.7 589 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052198
WBRNAi00018018
WBRNAi00035053
WBRNAi00023564

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T02C5.3a 2699280 2699409 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020160 igcm-3 T02C5.3 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:T02C5.3a 2699280 2699409 -1
CDS:T02C5.3a 2699462 2699507 -1
CDS:T02C5.3a 2700452 2700591 -1
CDS:T02C5.3a 2700990 2701147 -1
CDS:T02C5.3a 2701768 2702309 -1
CDS:T02C5.3a 2702365 2702492 -1
CDS:T02C5.3a 2702536 2702667 -1
CDS:T02C5.3a 2702928 2703036 -1
CDS:T02C5.3a 2703128 2703206 -1
CDS:T02C5.3a 2705505 2705758 -1
CDS:T02C5.3a 2705805 2705856 -1

1 Sequence

Length
1770

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T02C5.3a.1 T02C5.3a.1 2796   X: 2698257-2705859