WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02C5.5b.1 Sequence Name  T02C5.5b.1
Length (nt)  6848   Chromosome Location  X: 2710920-2736277
Chromosome . Primary Identifier  X Chromosome Location . Start  2710920
Chromosome Location . End  2736277 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02C5.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006742 unc-2 T02C5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02C5.5b T02C5.5b 6084   X: 2711628-2711798

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.5b.1 2710920 2736277 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226417   879   X: 2710920-2711798 Caenorhabditis elegans
Exon226436   185   X: 2712355-2712539 Caenorhabditis elegans
Exon226446   150   X: 2712582-2712731 Caenorhabditis elegans
Exon226460   291   X: 2712787-2713077 Caenorhabditis elegans
Exon226474   121   X: 2713276-2713396 Caenorhabditis elegans
Exon226493   88   X: 2715092-2715179 Caenorhabditis elegans
Exon226507   101   X: 2716008-2716108 Caenorhabditis elegans
Exon226521   213   X: 2716157-2716369 Caenorhabditis elegans
Exon226539   89   X: 2716915-2717003 Caenorhabditis elegans
Exon226554   311   X: 2717108-2717418 Caenorhabditis elegans
Exon226569   653   X: 2717465-2718117 Caenorhabditis elegans
Exon226584   783   X: 2718804-2719586 Caenorhabditis elegans
Exon226599   106   X: 2719637-2719742 Caenorhabditis elegans
Exon226614   107   X: 2720170-2720276 Caenorhabditis elegans
Exon226629   287   X: 2720819-2721105 Caenorhabditis elegans
Exon226644   213   X: 2721155-2721367 Caenorhabditis elegans
Exon226659   121   X: 2721418-2721538 Caenorhabditis elegans
Exon226674   428   X: 2721584-2722011 Caenorhabditis elegans
Exon226689   128   X: 2722059-2722186 Caenorhabditis elegans
Exon226704   58   X: 2722642-2722699 Caenorhabditis elegans
Exon226718   227   X: 2723235-2723461 Caenorhabditis elegans
Exon226734   90   X: 2724083-2724172 Caenorhabditis elegans
Exon226749   193   X: 2724219-2724411 Caenorhabditis elegans
Exon226764   273   X: 2724464-2724736 Caenorhabditis elegans
Exon226779   128   X: 2724824-2724951 Caenorhabditis elegans
Exon226795   320   X: 2725442-2725761 Caenorhabditis elegans
Exon226808   97   X: 2730538-2730634 Caenorhabditis elegans
Exon226823   208   X: 2736070-2736277 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.5b.1 2710920 2736277 -1

1 Sequence

Length
6848

1 Sequence Ontology Term

Identifier Name Description
transcript