WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02C5.5g.1 Sequence Name  T02C5.5g.1
Length (nt)  6851   Chromosome Location  X: 2710921-2736311
Chromosome . Primary Identifier  X Chromosome Location . Start  2710921
Chromosome Location . End  2736311 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02C5.5g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006742 unc-2 T02C5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02C5.5g T02C5.5g 6144   X: 2711628-2711798

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.5g.1 2710921 2736311 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226418   878   X: 2710921-2711798 Caenorhabditis elegans
Exon226433   179   X: 2712355-2712533 Caenorhabditis elegans
Exon226449   150   X: 2712582-2712731 Caenorhabditis elegans
Exon226463   291   X: 2712787-2713077 Caenorhabditis elegans
Exon226477   121   X: 2713276-2713396 Caenorhabditis elegans
Exon226496   88   X: 2715092-2715179 Caenorhabditis elegans
Exon226510   101   X: 2716008-2716108 Caenorhabditis elegans
Exon226524   213   X: 2716157-2716369 Caenorhabditis elegans
Exon226542   89   X: 2716915-2717003 Caenorhabditis elegans
Exon226557   311   X: 2717108-2717418 Caenorhabditis elegans
Exon226572   653   X: 2717465-2718117 Caenorhabditis elegans
Exon226587   783   X: 2718804-2719586 Caenorhabditis elegans
Exon226602   106   X: 2719637-2719742 Caenorhabditis elegans
Exon226617   107   X: 2720170-2720276 Caenorhabditis elegans
Exon226632   287   X: 2720819-2721105 Caenorhabditis elegans
Exon226647   213   X: 2721155-2721367 Caenorhabditis elegans
Exon226662   121   X: 2721418-2721538 Caenorhabditis elegans
Exon226677   428   X: 2721584-2722011 Caenorhabditis elegans
Exon226692   128   X: 2722059-2722186 Caenorhabditis elegans
Exon226707   58   X: 2722642-2722699 Caenorhabditis elegans
Exon226726   203   X: 2723259-2723461 Caenorhabditis elegans
Exon226737   90   X: 2724083-2724172 Caenorhabditis elegans
Exon226752   193   X: 2724219-2724411 Caenorhabditis elegans
Exon226767   273   X: 2724464-2724736 Caenorhabditis elegans
Exon226782   128   X: 2724824-2724951 Caenorhabditis elegans
Exon226797   320   X: 2725442-2725761 Caenorhabditis elegans
Exon226810   97   X: 2730538-2730634 Caenorhabditis elegans
Exon226825   242   X: 2736070-2736311 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.5g.1 2710921 2736311 -1

1 Sequence

Length
6851

1 Sequence Ontology Term

Identifier Name Description
transcript