WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02C5.5f.1 Sequence Name  T02C5.5f.1
Length (nt)  6894   Chromosome Location  X: 2710932-2736311
Chromosome . Primary Identifier  X Chromosome Location . Start  2710932
Chromosome Location . End  2736311 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02C5.5f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006742 unc-2 T02C5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02C5.5f T02C5.5f 6198   X: 2711628-2711798

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.5f.1 2710932 2736311 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226420   867   X: 2710932-2711798 Caenorhabditis elegans
Exon226432   179   X: 2712355-2712533 Caenorhabditis elegans
Exon226448   150   X: 2712582-2712731 Caenorhabditis elegans
Exon226462   291   X: 2712787-2713077 Caenorhabditis elegans
Exon226476   121   X: 2713276-2713396 Caenorhabditis elegans
Exon226489   54   X: 2714634-2714687 Caenorhabditis elegans
Exon226495   88   X: 2715092-2715179 Caenorhabditis elegans
Exon226509   101   X: 2716008-2716108 Caenorhabditis elegans
Exon226523   213   X: 2716157-2716369 Caenorhabditis elegans
Exon226541   89   X: 2716915-2717003 Caenorhabditis elegans
Exon226556   311   X: 2717108-2717418 Caenorhabditis elegans
Exon226571   653   X: 2717465-2718117 Caenorhabditis elegans
Exon226586   783   X: 2718804-2719586 Caenorhabditis elegans
Exon226601   106   X: 2719637-2719742 Caenorhabditis elegans
Exon226616   107   X: 2720170-2720276 Caenorhabditis elegans
Exon226631   287   X: 2720819-2721105 Caenorhabditis elegans
Exon226646   213   X: 2721155-2721367 Caenorhabditis elegans
Exon226661   121   X: 2721418-2721538 Caenorhabditis elegans
Exon226676   428   X: 2721584-2722011 Caenorhabditis elegans
Exon226691   128   X: 2722059-2722186 Caenorhabditis elegans
Exon226706   58   X: 2722642-2722699 Caenorhabditis elegans
Exon226725   203   X: 2723259-2723461 Caenorhabditis elegans
Exon226736   90   X: 2724083-2724172 Caenorhabditis elegans
Exon226751   193   X: 2724219-2724411 Caenorhabditis elegans
Exon226766   273   X: 2724464-2724736 Caenorhabditis elegans
Exon226781   128   X: 2724824-2724951 Caenorhabditis elegans
Exon226796   320   X: 2725442-2725761 Caenorhabditis elegans
Exon226809   97   X: 2730538-2730634 Caenorhabditis elegans
Exon226824   242   X: 2736070-2736311 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.5f.1 2710932 2736311 -1

1 Sequence

Length
6894

1 Sequence Ontology Term

Identifier Name Description
transcript