WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02C5.5n.1 Sequence Name  T02C5.5n.1
Length (nt)  6384   Chromosome Location  X: 2711628-2758027
Chromosome . Primary Identifier  X Chromosome Location . Start  2711628
Chromosome Location . End  2758027 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02C5.5n.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006742 unc-2 T02C5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02C5.5n T02C5.5n 6384   X: 2711628-2711798

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.5n.1 2711628 2758027 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226428   171   X: 2711628-2711798 Caenorhabditis elegans
Exon226442   185   X: 2712355-2712539 Caenorhabditis elegans
Exon226456   150   X: 2712582-2712731 Caenorhabditis elegans
Exon226470   291   X: 2712787-2713077 Caenorhabditis elegans
Exon226484   121   X: 2713276-2713396 Caenorhabditis elegans
Exon226503   88   X: 2715092-2715179 Caenorhabditis elegans
Exon226517   101   X: 2716008-2716108 Caenorhabditis elegans
Exon226531   213   X: 2716157-2716369 Caenorhabditis elegans
Exon226549   89   X: 2716915-2717003 Caenorhabditis elegans
Exon226564   311   X: 2717108-2717418 Caenorhabditis elegans
Exon226579   653   X: 2717465-2718117 Caenorhabditis elegans
Exon226594   783   X: 2718804-2719586 Caenorhabditis elegans
Exon226609   106   X: 2719637-2719742 Caenorhabditis elegans
Exon226624   107   X: 2720170-2720276 Caenorhabditis elegans
Exon226639   287   X: 2720819-2721105 Caenorhabditis elegans
Exon226654   213   X: 2721155-2721367 Caenorhabditis elegans
Exon226669   121   X: 2721418-2721538 Caenorhabditis elegans
Exon226684   428   X: 2721584-2722011 Caenorhabditis elegans
Exon226699   128   X: 2722059-2722186 Caenorhabditis elegans
Exon226714   58   X: 2722642-2722699 Caenorhabditis elegans
Exon226719   227   X: 2723235-2723461 Caenorhabditis elegans
Exon226744   90   X: 2724083-2724172 Caenorhabditis elegans
Exon226759   193   X: 2724219-2724411 Caenorhabditis elegans
Exon226774   273   X: 2724464-2724736 Caenorhabditis elegans
Exon226789   128   X: 2724824-2724951 Caenorhabditis elegans
Exon226804   320   X: 2725442-2725761 Caenorhabditis elegans
Exon226817   97   X: 2730538-2730634 Caenorhabditis elegans
Exon226836   87   X: 2743655-2743741 Caenorhabditis elegans
Exon226840   170   X: 2747807-2747976 Caenorhabditis elegans
Exon226845   65   X: 2756287-2756351 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.5n.1 2711628 2758027 -1

1 Sequence

Length
6384

1 Sequence Ontology Term

Identifier Name Description
transcript