WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02C5.5o.1 Sequence Name  T02C5.5o.1
Length (nt)  6360   Chromosome Location  X: 2711628-2762050
Chromosome . Primary Identifier  X Chromosome Location . Start  2711628
Chromosome Location . End  2762050 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02C5.5o.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006742 unc-2 T02C5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02C5.5o T02C5.5o 6360   X: 2711628-2711798

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.5o.1 2711628 2762050 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226429   171   X: 2711628-2711798 Caenorhabditis elegans
Exon226443   185   X: 2712355-2712539 Caenorhabditis elegans
Exon226457   150   X: 2712582-2712731 Caenorhabditis elegans
Exon226471   291   X: 2712787-2713077 Caenorhabditis elegans
Exon226485   121   X: 2713276-2713396 Caenorhabditis elegans
Exon226504   88   X: 2715092-2715179 Caenorhabditis elegans
Exon226518   101   X: 2716008-2716108 Caenorhabditis elegans
Exon226532   213   X: 2716157-2716369 Caenorhabditis elegans
Exon226550   89   X: 2716915-2717003 Caenorhabditis elegans
Exon226565   311   X: 2717108-2717418 Caenorhabditis elegans
Exon226580   653   X: 2717465-2718117 Caenorhabditis elegans
Exon226595   783   X: 2718804-2719586 Caenorhabditis elegans
Exon226610   106   X: 2719637-2719742 Caenorhabditis elegans
Exon226625   107   X: 2720170-2720276 Caenorhabditis elegans
Exon226640   287   X: 2720819-2721105 Caenorhabditis elegans
Exon226655   213   X: 2721155-2721367 Caenorhabditis elegans
Exon226670   121   X: 2721418-2721538 Caenorhabditis elegans
Exon226685   428   X: 2721584-2722011 Caenorhabditis elegans
Exon226700   128   X: 2722059-2722186 Caenorhabditis elegans
Exon226715   58   X: 2722642-2722699 Caenorhabditis elegans
Exon226720   227   X: 2723235-2723461 Caenorhabditis elegans
Exon226745   90   X: 2724083-2724172 Caenorhabditis elegans
Exon226760   193   X: 2724219-2724411 Caenorhabditis elegans
Exon226775   273   X: 2724464-2724736 Caenorhabditis elegans
Exon226790   128   X: 2724824-2724951 Caenorhabditis elegans
Exon226805   320   X: 2725442-2725761 Caenorhabditis elegans
Exon226818   97   X: 2730538-2730634 Caenorhabditis elegans
Exon226837   87   X: 2743655-2743741 Caenorhabditis elegans
Exon226841   170   X: 2747807-2747976 Caenorhabditis elegans
Exon226846   65   X: 2756287-2756351 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T02C5.5o.1 2711628 2762050 -1

1 Sequence

Length
6360

1 Sequence Ontology Term

Identifier Name Description
transcript