WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C14A11.3b Sequence Name  C14A11.3b
Length (nt)  3168   Chromosome Location  X: 2772078-2772169
Chromosome . Primary Identifier  X Chromosome Location . Start  2772078
Chromosome Location . End  2772169
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14A11.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47800 CGEF-1, isoform b 119.7 1055 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00086072
WBRNAi00040461
WBRNAi00040462
WBRNAi00048512
WBRNAi00048514
WBRNAi00048515
WBRNAi00010704
WBRNAi00010705
WBRNAi00015737
WBRNAi00028854

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C14A11.3b 2772078 2772169 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006496 cgef-1 C14A11.3 Caenorhabditis elegans

22 Locations


Feature . Primary Identifier
Start End Strand
CDS:C14A11.3b 2772078 2772169 1
CDS:C14A11.3b 2773815 2773896 1
CDS:C14A11.3b 2774549 2774693 1
CDS:C14A11.3b 2775127 2775210 1
CDS:C14A11.3b 2775385 2775493 1
CDS:C14A11.3b 2776119 2776209 1
CDS:C14A11.3b 2778330 2778440 1
CDS:C14A11.3b 2779686 2779802 1
CDS:C14A11.3b 2780664 2780813 1
CDS:C14A11.3b 2781493 2781634 1
CDS:C14A11.3b 2782528 2782625 1
CDS:C14A11.3b 2785576 2785695 1
CDS:C14A11.3b 2786092 2786160 1
CDS:C14A11.3b 2786206 2786331 1
CDS:C14A11.3b 2786374 2786499 1
CDS:C14A11.3b 2787613 2787696 1
CDS:C14A11.3b 2789983 2790123 1
CDS:C14A11.3b 2796605 2796709 1
CDS:C14A11.3b 2796762 2797000 1
CDS:C14A11.3b 2797439 2797955 1
CDS:C14A11.3b 2798004 2798348 1
CDS:C14A11.3b 2798696 2798770 1

1 Sequence

Length
3168

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C14A11.3b.1 C14A11.3b.1 3677   X: 2772042-2799243