WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53B3.3.1 Sequence Name  F53B3.3.1
Length (nt)  2305   Chromosome Location  X: 2865914-2871137
Chromosome . Primary Identifier  X Chromosome Location . Start  2865914
Chromosome Location . End  2871137 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018742 F53B3.3 F53B3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53B3.3 F53B3.3 2070   X: 2866072-2866169

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53B3.3.1 2865914 2871137 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227050   256   X: 2865914-2866169 Caenorhabditis elegans
Exon227051   68   X: 2866231-2866298 Caenorhabditis elegans
Exon227052   230   X: 2866517-2866746 Caenorhabditis elegans
Exon227053   445   X: 2866993-2867437 Caenorhabditis elegans
Exon227054   112   X: 2867489-2867600 Caenorhabditis elegans
Exon227055   163   X: 2867653-2867815 Caenorhabditis elegans
Exon227056   198   X: 2868594-2868791 Caenorhabditis elegans
Exon227057   117   X: 2868836-2868952 Caenorhabditis elegans
Exon227058   153   X: 2868998-2869150 Caenorhabditis elegans
Exon227059   102   X: 2869200-2869301 Caenorhabditis elegans
Exon227060   226   X: 2869351-2869576 Caenorhabditis elegans
Exon227062   76   X: 2870820-2870895 Caenorhabditis elegans
Exon227063   159   X: 2870979-2871137 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53B3.3.1 2865914 2871137 -1

1 Sequence

Length
2305

1 Sequence Ontology Term

Identifier Name Description
transcript