WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52B10.2.1 Sequence Name  F52B10.2.1
Length (nt)  1041   Chromosome Location  X: 2918647-2923988
Chromosome . Primary Identifier  X Chromosome Location . Start  2918647
Chromosome Location . End  2923988 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52B10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044303 hst-3.2 F52B10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52B10.2 F52B10.2 876   X: 2918805-2919010

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52B10.2.1 2918647 2923988 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227153   364   X: 2918647-2919010 Caenorhabditis elegans
Exon227154   288   X: 2919060-2919347 Caenorhabditis elegans
Exon227155   155   X: 2919397-2919551 Caenorhabditis elegans
Exon227159   234   X: 2923755-2923988 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52B10.2.1 2918647 2923988 -1

1 Sequence

Length
1041

1 Sequence Ontology Term

Identifier Name Description
transcript