WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H10A.2.1 Sequence Name  Y71H10A.2.1
Length (nt)  2331   Chromosome Location  X: 2933361-2937742
Chromosome . Primary Identifier  X Chromosome Location . Start  2933361
Chromosome Location . End  2937742 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H10A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022200 fard-1 Y71H10A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H10A.2 Y71H10A.2 1611   X: 2933374-2933559

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H10A.2.1 2933361 2937742 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227168   199   X: 2933361-2933559 Caenorhabditis elegans
Exon227170   129   X: 2933605-2933733 Caenorhabditis elegans
Exon227174   126   X: 2933779-2933904 Caenorhabditis elegans
Exon227178   60   X: 2933949-2934008 Caenorhabditis elegans
Exon227182   75   X: 2934066-2934140 Caenorhabditis elegans
Exon227186   314   X: 2935298-2935611 Caenorhabditis elegans
Exon227190   97   X: 2935668-2935764 Caenorhabditis elegans
Exon227194   143   X: 2936312-2936454 Caenorhabditis elegans
Exon227198   258   X: 2936503-2936760 Caenorhabditis elegans
Exon227205   930   X: 2936813-2937742 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H10A.2.1 2933361 2937742 1

1 Sequence

Length
2331

1 Sequence Ontology Term

Identifier Name Description
transcript