WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71H10A.2.2 Sequence Name  Y71H10A.2.2
Length (nt)  1998   Chromosome Location  X: 2933361-2937730
Chromosome . Primary Identifier  X Chromosome Location . Start  2933361
Chromosome Location . End  2937730 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71H10A.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022200 fard-1 Y71H10A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71H10A.2 Y71H10A.2 1611   X: 2933374-2933559

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71H10A.2.2 2933361 2937730 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227169   199   X: 2933361-2933559 Caenorhabditis elegans
Exon227171   129   X: 2933605-2933733 Caenorhabditis elegans
Exon227175   126   X: 2933779-2933904 Caenorhabditis elegans
Exon227179   60   X: 2933949-2934008 Caenorhabditis elegans
Exon227183   75   X: 2934066-2934140 Caenorhabditis elegans
Exon227187   314   X: 2935298-2935611 Caenorhabditis elegans
Exon227191   97   X: 2935668-2935764 Caenorhabditis elegans
Exon227195   143   X: 2936312-2936454 Caenorhabditis elegans
Exon227199   258   X: 2936503-2936760 Caenorhabditis elegans
Exon227204   430   X: 2936813-2937242 Caenorhabditis elegans
Exon227208   167   X: 2937564-2937730 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71H10A.2.2 2933361 2937730 1

1 Sequence

Length
1998

1 Sequence Ontology Term

Identifier Name Description
transcript