WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41G9A.3.1 Sequence Name  Y41G9A.3.1
Length (nt)  1428   Chromosome Location  X: 2976448-2981027
Chromosome . Primary Identifier  X Chromosome Location . Start  2976448
Chromosome Location . End  2981027 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41G9A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021527 aakg-3 Y41G9A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41G9A.3 Y41G9A.3 1278   X: 2976473-2976542

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41G9A.3.1 2976448 2981027 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227313   95   X: 2976448-2976542 Caenorhabditis elegans
Exon227314   94   X: 2977165-2977258 Caenorhabditis elegans
Exon227315   101   X: 2977322-2977422 Caenorhabditis elegans
Exon227316   135   X: 2977798-2977932 Caenorhabditis elegans
Exon227317   77   X: 2977979-2978055 Caenorhabditis elegans
Exon227318   118   X: 2978773-2978890 Caenorhabditis elegans
Exon227319   185   X: 2978941-2979125 Caenorhabditis elegans
Exon227320   81   X: 2979180-2979260 Caenorhabditis elegans
Exon227321   93   X: 2979311-2979403 Caenorhabditis elegans
Exon227322   108   X: 2980473-2980580 Caenorhabditis elegans
Exon227323   123   X: 2980629-2980751 Caenorhabditis elegans
Exon227324   218   X: 2980810-2981027 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41G9A.3.1 2976448 2981027 1

1 Sequence

Length
1428

1 Sequence Ontology Term

Identifier Name Description
transcript