WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41G9A.1.1 Sequence Name  Y41G9A.1.1
Length (nt)  2605   Chromosome Location  X: 2984263-2991478
Chromosome . Primary Identifier  X Chromosome Location . Start  2984263
Chromosome Location . End  2991478 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41G9A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003885 osm-5 Y41G9A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41G9A.1 Y41G9A.1 2463   X: 2984278-2984358

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41G9A.1.1 2984263 2991478 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227330   96   X: 2984263-2984358 Caenorhabditis elegans
Exon227331   63   X: 2984952-2985014 Caenorhabditis elegans
Exon227332   70   X: 2985363-2985432 Caenorhabditis elegans
Exon227333   105   X: 2985484-2985588 Caenorhabditis elegans
Exon227334   46   X: 2985639-2985684 Caenorhabditis elegans
Exon227335   310   X: 2985735-2986044 Caenorhabditis elegans
Exon227336   226   X: 2986454-2986679 Caenorhabditis elegans
Exon227337   238   X: 2986726-2986963 Caenorhabditis elegans
Exon227338   208   X: 2987386-2987593 Caenorhabditis elegans
Exon227339   302   X: 2987915-2988216 Caenorhabditis elegans
Exon227340   151   X: 2988263-2988413 Caenorhabditis elegans
Exon227341   116   X: 2989319-2989434 Caenorhabditis elegans
Exon227342   204   X: 2989514-2989717 Caenorhabditis elegans
Exon227343   212   X: 2989767-2989978 Caenorhabditis elegans
Exon227345   258   X: 2991221-2991478 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41G9A.1.1 2984263 2991478 1

1 Sequence

Length
2605

1 Sequence Ontology Term

Identifier Name Description
transcript