WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33D12.2a.1 Sequence Name  C33D12.2a.1
Length (nt)  2934   Chromosome Location  X: 3036427-3045847
Chromosome . Primary Identifier  X Chromosome Location . Start  3036427
Chromosome Location . End  3045847 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33D12.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016343 cnnm-3 C33D12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33D12.2a C33D12.2a 2394   X: 3036926-3037063

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33D12.2a.1 3036427 3045847 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227438   637   X: 3036427-3037063 Caenorhabditis elegans
Exon227445   64   X: 3037449-3037512 Caenorhabditis elegans
Exon227454   113   X: 3037558-3037670 Caenorhabditis elegans
Exon227463   279   X: 3038530-3038808 Caenorhabditis elegans
Exon227473   168   X: 3038858-3039025 Caenorhabditis elegans
Exon227482   183   X: 3041987-3042169 Caenorhabditis elegans
Exon227489   164   X: 3042314-3042477 Caenorhabditis elegans
Exon227498   274   X: 3043124-3043397 Caenorhabditis elegans
Exon227502   88   X: 3043481-3043568 Caenorhabditis elegans
Exon227506   323   X: 3043615-3043937 Caenorhabditis elegans
Exon227510   145   X: 3044367-3044511 Caenorhabditis elegans
Exon227516   186   X: 3044560-3044745 Caenorhabditis elegans
Exon227522   194   X: 3044798-3044991 Caenorhabditis elegans
Exon227529   116   X: 3045732-3045847 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33D12.2a.1 3036427 3045847 -1

1 Sequence

Length
2934

1 Sequence Ontology Term

Identifier Name Description
transcript