WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33D12.2c.1 Sequence Name  C33D12.2c.1
Length (nt)  2832   Chromosome Location  X: 3036544-3045806
Chromosome . Primary Identifier  X Chromosome Location . Start  3036544
Chromosome Location . End  3045806 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33D12.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016343 cnnm-3 C33D12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33D12.2c C33D12.2c 2301   X: 3037319-3037363

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33D12.2c.1 3036544 3045806 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227442   520   X: 3036544-3037063 Caenorhabditis elegans
Exon227443   56   X: 3037308-3037363 Caenorhabditis elegans
Exon227452   64   X: 3037449-3037512 Caenorhabditis elegans
Exon227461   113   X: 3037558-3037670 Caenorhabditis elegans
Exon227470   279   X: 3038530-3038808 Caenorhabditis elegans
Exon227480   168   X: 3038858-3039025 Caenorhabditis elegans
Exon227488   183   X: 3041987-3042169 Caenorhabditis elegans
Exon227494   164   X: 3042314-3042477 Caenorhabditis elegans
Exon227501   274   X: 3043124-3043397 Caenorhabditis elegans
Exon227505   88   X: 3043481-3043568 Caenorhabditis elegans
Exon227509   323   X: 3043615-3043937 Caenorhabditis elegans
Exon227515   145   X: 3044367-3044511 Caenorhabditis elegans
Exon227521   186   X: 3044560-3044745 Caenorhabditis elegans
Exon227526   194   X: 3044798-3044991 Caenorhabditis elegans
Exon227528   75   X: 3045732-3045806 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33D12.2c.1 3036544 3045806 -1

1 Sequence

Length
2832

1 Sequence Ontology Term

Identifier Name Description
transcript