WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33D12.3.1 Sequence Name  C33D12.3.1
Length (nt)  2096   Chromosome Location  X: 3050369-3054824
Chromosome . Primary Identifier  X Chromosome Location . Start  3050369
Chromosome Location . End  3054824 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33D12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006679 twk-26 C33D12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33D12.3 C33D12.3 1560   X: 3050494-3050566

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33D12.3.1 3050369 3054824 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227534   198   X: 3050369-3050566 Caenorhabditis elegans
Exon227535   179   X: 3051256-3051434 Caenorhabditis elegans
Exon227536   138   X: 3051519-3051656 Caenorhabditis elegans
Exon227537   177   X: 3051706-3051882 Caenorhabditis elegans
Exon227538   86   X: 3051926-3052011 Caenorhabditis elegans
Exon227539   143   X: 3052838-3052980 Caenorhabditis elegans
Exon227540   299   X: 3053026-3053324 Caenorhabditis elegans
Exon227541   123   X: 3053371-3053493 Caenorhabditis elegans
Exon227542   143   X: 3053549-3053691 Caenorhabditis elegans
Exon227543   133   X: 3053736-3053868 Caenorhabditis elegans
Exon227544   50   X: 3054302-3054351 Caenorhabditis elegans
Exon227545   427   X: 3054398-3054824 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33D12.3.1 3050369 3054824 -1

1 Sequence

Length
2096

1 Sequence Ontology Term

Identifier Name Description
transcript