WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52E4.1a Sequence Name  F52E4.1a
Length (nt)  1611   Chromosome Location  X: 3090437-3090493
Chromosome . Primary Identifier  X Chromosome Location . Start  3090437
Chromosome Location . End  3090493
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52E4.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE07269 PCCB-1, isoform a 58.5 536 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00000686
WBRNAi00047996
WBRNAi00015421
WBRNAi00032624
WBRNAi00106989

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52E4.1a 3090437 3090493 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018701 pccb-1 F52E4.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52E4.1a 3090437 3090493 1
CDS:F52E4.1a 3090553 3090672 1
CDS:F52E4.1a 3090725 3091733 1
CDS:F52E4.1a 3091787 3092211 1

1 Sequence

Length
1611

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52E4.1a.1 F52E4.1a.1 1847   X: 3090427-3092437