WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10B3.8.1 Sequence Name  K10B3.8.1
Length (nt)  1152   Chromosome Location  X: 3113443-3114689
Chromosome . Primary Identifier  X Chromosome Location . Start  3113443
Chromosome Location . End  3114689 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10B3.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001684 gpd-2 K10B3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10B3.8 K10B3.8 1026   X: 3113567-3114223

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10B3.8.1 3113443 3114689 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227693   781   X: 3113443-3114223 Caenorhabditis elegans
Exon227694   129   X: 3114270-3114398 Caenorhabditis elegans
Exon227695   242   X: 3114448-3114689 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10B3.8.1 3113443 3114689 -1

1 Sequence

Length
1152

1 Sequence Ontology Term

Identifier Name Description
transcript