WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:C15C7.2.1 Sequence Name  C15C7.2.1
Length (nt)  2068   Chromosome Location  X: 3159940-3164424
Chromosome . Primary Identifier  X Chromosome Location . Start  3159940
Chromosome Location . End  3164424 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15C7.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002220 gcc-1 C15C7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C15C7.2 C15C7.2 1785   X: 3159956-3160034

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C15C7.2.1 3159940 3164424 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227753   95   X: 3159940-3160034 Caenorhabditis elegans
Exon227754   86   X: 3160079-3160164 Caenorhabditis elegans
Exon227755   105   X: 3160220-3160324 Caenorhabditis elegans
Exon227756   213   X: 3160373-3160585 Caenorhabditis elegans
Exon227757   186   X: 3160639-3160824 Caenorhabditis elegans
Exon227758   108   X: 3160871-3160978 Caenorhabditis elegans
Exon227759   225   X: 3161443-3161667 Caenorhabditis elegans
Exon227760   269   X: 3161715-3161983 Caenorhabditis elegans
Exon227761   222   X: 3162029-3162250 Caenorhabditis elegans
Exon227762   119   X: 3163813-3163931 Caenorhabditis elegans
Exon227763   440   X: 3163985-3164424 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C15C7.2.1 3159940 3164424 1

1 Sequence

Length
2068

1 Sequence Ontology Term

Identifier Name Description
transcript