WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C15C7.7.1 Sequence Name  C15C7.7.1
Length (nt)  1284   Chromosome Location  X: 3165826-3167579
Chromosome . Primary Identifier  X Chromosome Location . Start  3165826
Chromosome Location . End  3167579 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15C7.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015793 pfut-1 C15C7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C15C7.7 C15C7.7 1170   X: 3165853-3165967

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C15C7.7.1 3165826 3167579 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227768   142   X: 3165826-3165967 Caenorhabditis elegans
Exon227769   110   X: 3166183-3166292 Caenorhabditis elegans
Exon227770   124   X: 3166350-3166473 Caenorhabditis elegans
Exon227771   386   X: 3166516-3166901 Caenorhabditis elegans
Exon227772   138   X: 3166948-3167085 Caenorhabditis elegans
Exon227773   102   X: 3167130-3167231 Caenorhabditis elegans
Exon227775   282   X: 3167298-3167579 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C15C7.7.1 3165826 3167579 1

1 Sequence

Length
1284

1 Sequence Ontology Term

Identifier Name Description
transcript